GST-PHF13

ID psp00061
Organism Homo sapiens
Length 518

PS Record in Articles

Reference (Pubmed ID) In vitro results In vivo results
40598901 Positive -

Protein Sequence

Sequence Variants

No protein variants available for this protein.

Orthologs and Paralogs

ID Name Organism Length
psp05026 PHF6 Homo sapiens 365
psp04993 PHF1 Homo sapiens 567
psp04511 PHF13 Homo sapiens 300
psp01199 PHF1 H115A Homo sapiens 567
psp01932 PHF1 K323A Homo sapiens 567
psp03801 PHF1 Y47A Homo sapiens 567
psp00819 PHF1 (1-511) Homo sapiens 511
psp00925 PHF1 (1-396) Homo sapiens 369
psp01315 PHF1 (330-511) Homo sapiens 182
psp02873 PHF1 (1-355) Homo sapiens 355
psp02983 PHF1 (28-567) Homo sapiens 540
psp03246 PHF1 (233-567) Homo sapiens 335
psp03378 PHF1 (330-567) Homo sapiens 238
psp03889 PHF1 IDR (337-529) Homo sapiens 193
psp04131 PHF1 (86-567) Homo sapiens 482
psp00213 PHF13 (Δ24-40, Δ272-280) Homo sapiens 274
psp00424 PHF13 (Δ24-40) Homo sapiens 283
psp03216 PHF13 (Δ24-40, Δ232-238) Homo sapiens 276
psp04867 PHF13 ΔPEST2 Homo sapiens 250
psp01661 GST-yCTD Saccharomyces cerevisiae 410
psp02366 GST-YFP-CBX2 Mus musculus 976
psp03058 GST-CBX2 Mus musculus 737
psp03726 GST-G3BP1 Synthetic 684
psp00431 GST Synthetic 218
psp02130 GST-RAP80 Synthetic 937
psp02539 GST-RNF168 IDR1-mEGFP Synthetic 663
psp02927 GST-RNF168 IDR2-mEGFP Synthetic 684
psp02762 GST-TACC3 Synthetic 1056
psp00291 GST-TACC Synthetic 463
psp01676 GST-TACC3 ΔTACC Synthetic 811

Biophysical Features

The chart can zoom in and zoom out by mouse wheel.

IDR (Intrinsically Disordered Region) was predicted by Mobidb-lite 4.0, please refer to: MobiDB-lite 4.0: faster prediction of intrinsic protein disorder and structural compactness.

Pi-Pi interaction was predicted by PScore, please refer to: Pi-Pi contacts are an overlooked protein feature relevant to phase separation.

PLAAC and PrD. like were both predicted by PLAAC, please refer to: PLAAC: a web and command-line application to identify proteins with prion-like amino acid composition.

LCR (Low Complexity Region) was predicted by SEG, please refer to: Statistics of local complexity in amino acid sequences and sequence databases.

NCPR (Net Charge Per Residue), FCR (Fraction of Charged Residues) and hydrophobicity were both computated by CIDER, please refer to: CIDER: Resources to Analyze Sequence-Ensemble Relationships of Intrinsically Disordered Proteins.

Polarity was computated by ProtScale, please refer to: ProtScale.

SASA (Solvent-Accessible Surface Area) was computated by BioPython based on the predicted structure, please refer to: Bio.PDB.SASA module.

Protein Structure

Colered by pLDDT:
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

Protein structure was predicted by Chai-1, which also produces predicted local distance difference test (pLDDT) score between 0 and 100.

For pLDDT, please refer to: pLDDT: Understanding local confidence