minielastin (20' 20'-21 23-24'-21 23'-24' 24')

ID psp03044
Organism Synthetic
Length 252

PS Record in Articles

Reference (Pubmed ID) In vitro results In vivo results
36067308 Positive -

Protein Sequence

Sequence Variants

ID Name Remain region Mutation sites Ref seq
psp03044 minielastin (20' 20'-21 23-24'-21 23'-24' 24') - -
psp00034 minielastin (20'-21 23-24'-21 23-24') - -
psp02727 minielastin (20'-21 23-24'-21 23-24' 24') - -
psp04362 minielastin (20'-24'-24' 24') - -

Orthologs and Paralogs

ID Name Organism Length
psp00065 EP20-24-24 Homo sapiens 200
psp00300 EP:K to A Homo sapiens 118
psp00351 EP:K to Y Homo sapiens 118
psp00722 EP300-IDR5 Homo sapiens 321
psp00759 EP20-24[23U] Homo sapiens 118
psp01104 EP(8-14)-36 Homo sapiens 137
psp01545 EP(8-14)-20-(21-23-24)6-36 Homo sapiens 665
psp01649 EP20-24-P12 Homo sapiens 206
psp01807 EP300-IDR4 Homo sapiens 245
psp02063 EP20-P9-P9 Homo sapiens 142
psp02223 EP20-24-24[8/12] Homo sapiens 218
psp03233 EP300-IDR1 Homo sapiens 332
psp03291 EP300-IDR3 Homo sapiens 403
psp03336 EP300-IDR2 Homo sapiens 151
psp03376 EP20-24-24-24-24 Homo sapiens 364
psp03656 EP20-24 Homo sapiens 118
psp01785 SKGP-[GRGDSPYS]40-GY Synthetic 326
psp04997 RLP Synthetic 166
psp00372 RLP(R-D2)-DBD Synthetic 295
psp02337 RLP-DBD Synthetic 295
psp02935 RLP-DBD-DD Synthetic 345
psp03461 RLP(S-Y)-DBD-DD Synthetic 345
psp00028 RLP(S-Y) Synthetic 166
psp04153 RLP(V:Y) Synthetic 166
psp04179 RLP(R-D2) Synthetic 166
psp05034 RLP(R-D) Synthetic 166
psp00465 SELP:20-24-W34 Synthetic 184
psp00474 ELP-V5A2G3 120 Synthetic 608
psp00728 EP20-24-24 Synthetic 195
psp01121 EP20-60P-60P Synthetic 201
psp01182 EP20-24-30r Synthetic 197
psp01320 EP20-30P-30P Synthetic 151
psp01331 EP30r-30r-30r Synthetic 207
psp01663 V5A2G3 120 Synthetic 600
psp01792 ELP V2A5-120 Synthetic 600
psp01817 ELP3 Synthetic 153
psp01890 EP20-30r-30r Synthetic 205
psp02449 EP20-24-30 Synthetic 176
psp02552 ELP KV6-112 Synthetic 560
psp02632 EP20-30-30 Synthetic 151
psp02713 A30V30 Synthetic 60
psp02795 resilin-like polypeptide (RLP) Drosophila melanogaster 262
psp02939 EP20-24-30P Synthetic 176
psp03139 V30G30 Synthetic 60
psp03149 ELP QV6-112 Synthetic 560
psp03175 V120 Synthetic 600
psp03188 ELP[M1V3-60] Synthetic 302
psp03255 EP20-24-60P Synthetic 195
psp03329 EP20-60-60 Synthetic 201
psp03404 EP20-60-24 Synthetic 195
psp03780 EP30P-30P-30P Synthetic 141
psp03840 SELP:W34-24-24 Synthetic 198
psp03869 EP20-24-30rP Synthetic 192
psp03920 ELP V2I7E-40 Synthetic 200
psp03922 ELP-V120 Synthetic 608
psp04168 EP20-24-60 Synthetic 195
psp04230 ELP V5A2G3-120 Synthetic 500
psp04305 EP30rP-30rP-30rP Synthetic 207
psp04346 V30A30 Synthetic 60
psp04411 ELP-QV6 112 Synthetic 568
psp04438 (VPGVG)80 Synthetic 400
psp04552 ELP V-120 Synthetic 600
psp04559 G30V30 Synthetic 60
psp04960 EP20-30-24 Synthetic 170
psp05011 EP20-30rP-30rP Synthetic 195
psp05085 EP30-30-30 Synthetic 141

Biophysical Features

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IDR (Intrinsically Disordered Region) was predicted by Mobidb-lite 4.0, please refer to: MobiDB-lite 4.0: faster prediction of intrinsic protein disorder and structural compactness.

Pi-Pi interaction was predicted by PScore, please refer to: Pi-Pi contacts are an overlooked protein feature relevant to phase separation.

PLAAC and PrD. like were both predicted by PLAAC, please refer to: PLAAC: a web and command-line application to identify proteins with prion-like amino acid composition.

LCR (Low Complexity Region) was predicted by SEG, please refer to: Statistics of local complexity in amino acid sequences and sequence databases.

NCPR (Net Charge Per Residue), FCR (Fraction of Charged Residues) and hydrophobicity were both computated by CIDER, please refer to: CIDER: Resources to Analyze Sequence-Ensemble Relationships of Intrinsically Disordered Proteins.

Polarity was computated by ProtScale, please refer to: ProtScale.

SASA (Solvent-Accessible Surface Area) was computated by BioPython based on the predicted structure, please refer to: Bio.PDB.SASA module.

Protein Structure

Colered by pLDDT:
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

Protein structure was predicted by Chai-1, which also produces predicted local distance difference test (pLDDT) score between 0 and 100.

For pLDDT, please refer to: pLDDT: Understanding local confidence