KIF1C ΔIDR3

ID psp02301
Organism Homo sapiens
Length 1032

PS Record in Articles

Reference (Pubmed ID) In vitro results In vivo results
38898313 - Positive

Protein Sequence

Sequence Variants

ID Name Remain region Mutation sites Ref seq
psp03864 KIF1C 1-1103 - ✓
psp02301 KIF1C ΔIDR3 1-1032 -
psp00697 KIF1C 691-1103 691-1103 -
psp00851 KIF1C 500-1103 500-1103 -
psp01401 KIF1C ΔIDR2b 1-985, 1033-1103 -
psp01707 KIF1C 595-1103 595-1103 -
psp01842 KIF1C ΔPLD 1-1053, 1081-1103 -
psp02554 KIF1C ΔIDR2a 1-937, 986-1103 -
psp03531 KIF1C 785-1103 785-1103 -
psp03658 KIF1C ΔIDR1 1-884, 937-1103 -
psp03807 KIF1C ΔIDR2 1-937, 1033-1103 -
psp04029 KIF1C 886-1103 886-1103 -
psp01756 KIF1C PLDmut - Q1054A, N1059A, Q1063A, Q1066A, Q1071A

Orthologs and Paralogs

No orthologs or paralogs found for this protein in the database.

Biophysical Features

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IDR (Intrinsically Disordered Region) was predicted by Mobidb-lite 4.0, please refer to: MobiDB-lite 4.0: faster prediction of intrinsic protein disorder and structural compactness.

Pi-Pi interaction was predicted by PScore, please refer to: Pi-Pi contacts are an overlooked protein feature relevant to phase separation.

PLAAC and PrD. like were both predicted by PLAAC, please refer to: PLAAC: a web and command-line application to identify proteins with prion-like amino acid composition.

LCR (Low Complexity Region) was predicted by SEG, please refer to: Statistics of local complexity in amino acid sequences and sequence databases.

NCPR (Net Charge Per Residue), FCR (Fraction of Charged Residues) and hydrophobicity were both computated by CIDER, please refer to: CIDER: Resources to Analyze Sequence-Ensemble Relationships of Intrinsically Disordered Proteins.

Polarity was computated by ProtScale, please refer to: ProtScale.

SASA (Solvent-Accessible Surface Area) was computated by BioPython based on the predicted structure, please refer to: Bio.PDB.SASA module.

Protein Structure

Colered by pLDDT:
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

Protein structure was predicted by Chai-1, which also produces predicted local distance difference test (pLDDT) score between 0 and 100.

For pLDDT, please refer to: pLDDT: Understanding local confidence