Rapsn R242W

ID psp01987
Organism Mus musculus
Length 412

PS Record in Articles

Reference (Pubmed ID) In vitro results In vivo results
34033754 Positive -

Protein Sequence

Sequence Variants

ID Name Remain region Mutation sites Ref seq
psp00920 Rapsn 1-412 - ✓
psp01987 Rapsn R242W - R242W
psp00685 Rapsn (TPR1-2) 1-76 -
psp01166 Rapsn (CC-RING) 287-412 -
psp02311 Rapsn (TPR5-7) 159-285, 412-412 -
psp02980 Rapsn (TPR3-4) 77-158 -
psp03751 Rapsn (TPR1-7) 1-285, 412-412 -
psp04958 Rapsn (TPR1-4) 1-158 -
psp00574 Rapsn C366A - C366A
psp00776 Rapsn L326P - L326P
psp00824 Rapsn (Y86F) - Y86F
psp01252 Rapsn E147K - E147K
psp01504 Rapsn L14P - L14P
psp01852 Rapsn Q3K - Q3K
psp01883 Rapsn N88K - N88K
psp02346 Rapsn R164H - R164H
psp03116 Rapsn L283P - L283P
psp03213 Rapsn R91L - R91L
psp04005 Rapsn A73D - A73D
psp04716 Rapsn L169P - L169P
psp05191 Rapsn A142D - A142D

Orthologs and Paralogs

No orthologs or paralogs found for this protein in the database.

Biophysical Features

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IDR (Intrinsically Disordered Region) was predicted by Mobidb-lite 4.0, please refer to: MobiDB-lite 4.0: faster prediction of intrinsic protein disorder and structural compactness.

Pi-Pi interaction was predicted by PScore, please refer to: Pi-Pi contacts are an overlooked protein feature relevant to phase separation.

PLAAC and PrD. like were both predicted by PLAAC, please refer to: PLAAC: a web and command-line application to identify proteins with prion-like amino acid composition.

LCR (Low Complexity Region) was predicted by SEG, please refer to: Statistics of local complexity in amino acid sequences and sequence databases.

NCPR (Net Charge Per Residue), FCR (Fraction of Charged Residues) and hydrophobicity were both computated by CIDER, please refer to: CIDER: Resources to Analyze Sequence-Ensemble Relationships of Intrinsically Disordered Proteins.

Polarity was computated by ProtScale, please refer to: ProtScale.

SASA (Solvent-Accessible Surface Area) was computated by BioPython based on the predicted structure, please refer to: Bio.PDB.SASA module.

Protein Structure

Colered by pLDDT:
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

Protein structure was predicted by Chai-1, which also produces predicted local distance difference test (pLDDT) score between 0 and 100.

For pLDDT, please refer to: pLDDT: Understanding local confidence