LplA Y11A

ID psp00050
Organism Escherichia coli
Length 337

PS Record in Articles

Reference (Pubmed ID) In vitro results In vivo results
40069234 - Positive

Protein Sequence

Sequence Variants

ID Name Remain region Mutation sites Ref seq
psp01049 LplA 1-337 -
psp00050 LplA Y11A - Y11A
psp00018 LplA Q309A - Q309A
psp00149 LplA D12K - D12K
psp00232 LplA Q298A - Q298A
psp00276 LplA R25E - R25E
psp00339 LplA E233K - E233K
psp00398 LplA W52A - W52A
psp00682 LplA R47E - R47E
psp01088 LplA R66E - R66E
psp01275 LplA E21K - E21K
psp01570 LplA W243A - W243A
psp01789 LplA R303K - R303K
psp02122 LplA F235A - F235A
psp02147 LplA R58E - R58E
psp02261 LplA E320K - E320K
psp02392 LplA D317K - D317K
psp02658 LplA E322K - E322K
psp02824 LplA Q308A - Q308A
psp02869 LplA R237E - R237E
psp02911 LplA E291K - E291K
psp03104 LplA E61K - E61K
psp03331 LplA W241A - W241A
psp03503 LplA E62K - E62K
psp03660 LplA D41K - D41K
psp03673 LplA D9K - D9K
psp03802 LplA R277E - R277E
psp03975 LplA E242K - E242K
psp04134 LplA W14A - W14A
psp04182 LplA R140E - R140E
psp04339 LplA H274A - H274A
psp04351 LplA R296K - R296K
psp04956 LplA K143E - K143E

Orthologs and Paralogs

No orthologs or paralogs found for this protein in the database.

Biophysical Features

The chart can zoom in and zoom out by mouse wheel.

IDR (Intrinsically Disordered Region) was predicted by Mobidb-lite 4.0, please refer to: MobiDB-lite 4.0: faster prediction of intrinsic protein disorder and structural compactness.

Pi-Pi interaction was predicted by PScore, please refer to: Pi-Pi contacts are an overlooked protein feature relevant to phase separation.

PLAAC and PrD. like were both predicted by PLAAC, please refer to: PLAAC: a web and command-line application to identify proteins with prion-like amino acid composition.

LCR (Low Complexity Region) was predicted by SEG, please refer to: Statistics of local complexity in amino acid sequences and sequence databases.

NCPR (Net Charge Per Residue), FCR (Fraction of Charged Residues) and hydrophobicity were both computated by CIDER, please refer to: CIDER: Resources to Analyze Sequence-Ensemble Relationships of Intrinsically Disordered Proteins.

Polarity was computated by ProtScale, please refer to: ProtScale.

SASA (Solvent-Accessible Surface Area) was computated by BioPython based on the predicted structure, please refer to: Bio.PDB.SASA module.

Protein Structure

Colered by pLDDT:
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

Protein structure was predicted by Chai-1, which also produces predicted local distance difference test (pLDDT) score between 0 and 100.

For pLDDT, please refer to: pLDDT: Understanding local confidence