EH2

Synonyms: ATEH2, F8K7.4, At1g21630, Calcium-binding EF hand family protein, F8K7_4

ID psp03468
Organism Arabidopsis thaliana
Length 1247
Source UniProt: F4HY32

PS Record in Articles

Reference (Pubmed ID) In vitro results In vivo results
38347182 - Positive

Protein Sequence

Sequence Variants

No protein variants available for this protein.

Orthologs and Paralogs

ID Name Organism Length
psp04549 EH1 Arabidopsis thaliana 1019
psp02139 EH1 (IDR1 replaced with HsITSN1) Synthetic 997
psp02582 EH1 (IDR1 replaced with ScEde1) Synthetic 1003
psp04052 EH1 (IDR1 replaced with ScPan1) Synthetic 1017
psp00787 EH1 12YF>W Arabidopsis thaliana 1019
psp00800 EH1 EH2 R>E Arabidopsis thaliana 1019
psp00918 EH1 26P>G Arabidopsis thaliana 1019
psp02694 EH1 12YF>S Arabidopsis thaliana 1019
psp03028 EH1 EH1 KR>E Arabidopsis thaliana 1019
psp03333 EH1 8KR>G Arabidopsis thaliana 1019
psp03723 EH1 6DE>A Arabidopsis thaliana 1019
psp04600 EH1 EH1-2 KR>E Arabidopsis thaliana 1019
psp00102 EH1 ΔIDR1 Arabidopsis thaliana 776
psp00554 EH1 ΔCC Arabidopsis thaliana 881
psp00591 EH1 ΔEH1 Arabidopsis thaliana 919
psp01967 EH1 ΔIDR2 Arabidopsis thaliana 927
psp02929 EH1 ΔCCΔIDR3 Arabidopsis thaliana 534
psp03110 EH1 ΔIDR3 Arabidopsis thaliana 671
psp03865 EH1 ΔEH2 Arabidopsis thaliana 935
psp01212 EH1 ΔIDR3 EH1-2 KR>E Arabidopsis thaliana 671
psp01688 EH1 ΔIDR3 EH2 R>E Arabidopsis thaliana 671
psp01917 EH1 ΔIDR3 EH1 KR>E Arabidopsis thaliana 671

Biophysical Features

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IDR (Intrinsically Disordered Region) was predicted by Mobidb-lite 4.0, please refer to: MobiDB-lite 4.0: faster prediction of intrinsic protein disorder and structural compactness.

Pi-Pi interaction was predicted by PScore, please refer to: Pi-Pi contacts are an overlooked protein feature relevant to phase separation.

PLAAC and PrD. like were both predicted by PLAAC, please refer to: PLAAC: a web and command-line application to identify proteins with prion-like amino acid composition.

LCR (Low Complexity Region) was predicted by SEG, please refer to: Statistics of local complexity in amino acid sequences and sequence databases.

NCPR (Net Charge Per Residue), FCR (Fraction of Charged Residues) and hydrophobicity were both computated by CIDER, please refer to: CIDER: Resources to Analyze Sequence-Ensemble Relationships of Intrinsically Disordered Proteins.

Polarity was computated by ProtScale, please refer to: ProtScale.

SASA (Solvent-Accessible Surface Area) was computated by BioPython based on the predicted structure, please refer to: Bio.PDB.SASA module.

Protein Structure

Colered by pLDDT:
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

Protein structure was predicted by Chai-1, which also produces predicted local distance difference test (pLDDT) score between 0 and 100.

For pLDDT, please refer to: pLDDT: Understanding local confidence