Cdc31

Synonyms: Cell division control protein 31, Nucleoporin CDC31, Nuclear pore protein CDC31, CDC31, DSK1, YOR257W

ID psp03390
Organism Saccharomyces cerevisiae
Length 161
Source UniProt: P06704

PS Record in Articles

Reference (Pubmed ID) In vitro results In vivo results
38150475 Positive -

Protein Sequence

Sequence Variants

No protein variants available for this protein.

Orthologs and Paralogs

ID Name Organism Length
psp01060 Cdc15 Schizosaccharomyces pombe 927
psp04791 Cdc6 Drosophila melanogaster 662
psp02059 Cdc15-IDR-SH3 (327-927) Schizosaccharomyces pombe 601
psp04026 Cdc6DIDR Drosophila melanogaster 432
psp02524 CEN2 Homo sapiens 172
psp04870 Cen Chlamydomonas reinhardtii 169
psp05196 CEN4 Plasmodium falciparum 171
psp03902 CEN1 Plasmodium falciparum 168
psp04918 CEN3 Plasmodium falciparum 179
psp03577 CEN2 Plasmodium falciparum 168
psp02562 CenA Trypanosoma brucei 196

Biophysical Features

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IDR (Intrinsically Disordered Region) was predicted by Mobidb-lite 4.0, please refer to: MobiDB-lite 4.0: faster prediction of intrinsic protein disorder and structural compactness.

Pi-Pi interaction was predicted by PScore, please refer to: Pi-Pi contacts are an overlooked protein feature relevant to phase separation.

PLAAC and PrD. like were both predicted by PLAAC, please refer to: PLAAC: a web and command-line application to identify proteins with prion-like amino acid composition.

LCR (Low Complexity Region) was predicted by SEG, please refer to: Statistics of local complexity in amino acid sequences and sequence databases.

NCPR (Net Charge Per Residue), FCR (Fraction of Charged Residues) and hydrophobicity were both computated by CIDER, please refer to: CIDER: Resources to Analyze Sequence-Ensemble Relationships of Intrinsically Disordered Proteins.

Polarity was computated by ProtScale, please refer to: ProtScale.

SASA (Solvent-Accessible Surface Area) was computated by BioPython based on the predicted structure, please refer to: Bio.PDB.SASA module.

Protein Structure

Colered by pLDDT:
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

Protein structure was predicted by Chai-1, which also produces predicted local distance difference test (pLDDT) score between 0 and 100.

For pLDDT, please refer to: pLDDT: Understanding local confidence