FLOE1L

ID psp00985
Organism Solanum tuberosum
Length 548

PS Record in Articles

Reference (Pubmed ID) In vitro results In vivo results
34233164 - Positive

Protein Sequence

Sequence Variants

No protein variants available for this protein.

Orthologs and Paralogs

ID Name Organism Length
psp03510 FLOE3 Arabidopsis thaliana 511
psp00352 FLOE1 Arabidopsis thaliana 496
psp01845 FLOE2 Arabidopsis thaliana 547
psp02958 FLOE2L Wollemia nobilis 249
psp03217 FLOE1L Wollemia nobilis 640
psp01018 FLOE1 15xY-S Arabidopsis thaliana 496
psp01046 FLOE1 8xY-S Arabidopsis thaliana 496
psp01881 FLOE1 8xY/F-S Arabidopsis thaliana 496
psp02894 FLOE1 15x Y-F Arabidopsis thaliana 496
psp03014 FLOE1 4x Y-W Arabidopsis thaliana 496
psp03896 FLOE1 5x S-Y Arabidopsis thaliana 496
psp01192 FLOE1 (ΔQPS) Arabidopsis thaliana 234
psp01430 FLOE1 (ΔCC) Arabidopsis thaliana 475
psp01929 FLOE1 (ΔDS) Arabidopsis thaliana 404
psp04204 FLOE1 (Δnucl) Arabidopsis thaliana 435
psp04329 FLOE1 (ΔDUF) Arabidopsis thaliana 437
psp00073 FLOE2L Chlamydomonas reinhardtii 553
psp00237 FLOE1L Coffea canephora 539
psp00354 FLOE2L Ostreoccocus tauri 331
psp00557 FLOE1L Theobroma cacao 552
psp00859 FLOE2L Klebsormidium nitens 565
psp01021 FLOE2L Physcomitrella patens 550
psp01058 FLOE2L Sphagnum fallax 560
psp01814 FLOE2L Bathycoccus prasinos 403
psp02068 FLOE2L Theobroma cacao 541
psp02768 FLOE2L Glycine max 573
psp03019 FLOE2L Dunaliella salina 496
psp03159 FLOE2L Solanum lycopersicum 493
psp03471 FLOE2L Selaginella moellendorffii 538
psp04226 FLOE1L Glycine max 477
psp04843 FLOE2L Marchantia polymorpha 635
psp04949 FLOE1L Solanum lycopersicum 498

Biophysical Features

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IDR (Intrinsically Disordered Region) was predicted by Mobidb-lite 4.0, please refer to: MobiDB-lite 4.0: faster prediction of intrinsic protein disorder and structural compactness.

Pi-Pi interaction was predicted by PScore, please refer to: Pi-Pi contacts are an overlooked protein feature relevant to phase separation.

PLAAC and PrD. like were both predicted by PLAAC, please refer to: PLAAC: a web and command-line application to identify proteins with prion-like amino acid composition.

LCR (Low Complexity Region) was predicted by SEG, please refer to: Statistics of local complexity in amino acid sequences and sequence databases.

NCPR (Net Charge Per Residue), FCR (Fraction of Charged Residues) and hydrophobicity were both computated by CIDER, please refer to: CIDER: Resources to Analyze Sequence-Ensemble Relationships of Intrinsically Disordered Proteins.

Polarity was computated by ProtScale, please refer to: ProtScale.

SASA (Solvent-Accessible Surface Area) was computated by BioPython based on the predicted structure, please refer to: Bio.PDB.SASA module.

Protein Structure

Colered by pLDDT:
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

Protein structure was predicted by Chai-1, which also produces predicted local distance difference test (pLDDT) score between 0 and 100.

For pLDDT, please refer to: pLDDT: Understanding local confidence